Why is 'Cool On' or 'Heat On' flashing on my display?

The flashing 'Cool On' or 'Heat On' message means the built-in compressor protection feature is engaged. This feature forces the compressor to wait a few minutes before restarting to prevent damage from restarting too soon after shutdown. Wait 5 minutes for the system to restart safely, and the message will stop flashing when the safe wait time has elapsed. (Page 15, 19)

From the official Honeywell TH6110D Programmable Digital Thermostat manual, page 15

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